Borevitz, J. O.: search on Z-Library

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1

Native Environment Modulates Leaf Size and Response to Simulated Foliar Shade across Wild Tomato Species

Chitwood, Daniel H., Headland, Lauren R., Filiault, Daniele L., Kumar, Ravi, Jiménez-Gómez, José M., Schrager, Amanda V., Park, Daniel S., Peng, Jie, Sinha, Neelima R., Maloof, Julin N., Borevitz, Jus

Journal:

Year:

2012

Language:

english

File:

PDF, 1.07 MB

english, 2012

2

CmCGG Methylation-Independent Parent-of-Origin Effects on Genome-Wide Transcript Levels in Isogenic Reciprocal F1 Triploid Plants

Donoghue, M. T. A., Fort, A., Clifton, R., Zhang, X., McKeown, P. C., Voigt-Zielinksi, M. L., Borevitz, J. O., Spillane, C.

Journal:

Year:

2014

Language:

english

File:

PDF, 861 KB

english, 2014

3

Gene flow between nascent species: geographic, genotypic and phenotypic differentiation within and between Aquilegia formosa and A. pubescens

Noutsos, C., Borevitz, J. O., Hodges, S. A.

Journal:

Molecular Ecology

Year:

2014

Language:

english

File:

PDF, 574 KB

english, 2014

4

Association Mapping across Numerous Traits Reveals Patterns of Functional Variation in Maize

Wallace, Jason G., Bradbury, Peter J., Zhang, Nengyi, Gibon, Yves, Stitt, Mark, Buckler, Edward S., Borevitz, Justin O.

Journal:

Year:

2014

Language:

english

File:

PDF, 1.15 MB

english, 2014

5

TraitCapture: genomic and environment modelling of plant phenomic data

Brown, Tim B, Cheng, Riyan, Sirault, Xavier RR, Rungrat, Tepsuda, Murray, Kevin D, Trtilek, Martin, Furbank, Robert T, Badger, Murray, Pogson, Barry J, Borevitz, Justin O

Journal:

Current Opinion in Plant Biology

Year:

2014

Language:

english

File:

PDF, 930 KB

english, 2014

6

Deep phenotyping: deep learning for temporal phenotype/genotype classification

Taghavi Namin, Sarah, Esmaeilzadeh, Mohammad, Najafi, Mohammad, Brown, Tim B., Borevitz, Justin O.

Journal:

Year:

2018

Language:

english

File:

PDF, 2.17 MB

english, 2018

7

Genetics of Local Adaptation in the Laboratory: Flowering Time Quantitative Trait Loci under Geographic and Seasonal Conditions in Arabidopsis

Li, Yan, Roycewicz, Peter, Smith, Evadne, Borevitz, Justin O., Dilkes, Brian

Journal:

Year:

2006

Language:

english

File:

PDF, 334 KB

english, 2006

8

Reconsidering plant memory: Intersections between stress recovery, RNA turnover, and epigenetics

Crisp, P. A., Ganguly, D., Eichten, S. R., Borevitz, J. O., Pogson, B. J.

Journal:

Science Advances

Year:

2016

Language:

english

File:

PDF, 680 KB

english, 2016

9

Control of Flowering Time and Cold Response by a NAC-Domain Protein in Arabidopsis

Yoo, So Yeon, Kim, Yunhee, Kim, Soo Young, Lee, Jong Seob, Ahn, Ji Hoon, Borevitz, Justin

Journal:

Year:

2007

Language:

english

File:

PDF, 706 KB

english, 2007

10

Quantitative trait locus mapping and DNA array hybridization identify an FLM deletion as a cause for natural flowering-time variation

Werner, J. D., Borevitz, J. O., Warthmann, N., Trainer, G. T., Ecker, J. R., Chory, J., Weigel, D.

Journal:

Proceedings of the National Academy of Sciences

Year:

2005

Language:

english

File:

PDF, 455 KB

english, 2005

11

The Impact of Genomics on the Study of Natural Variation in Arabidopsis

Borevitz, J. O.

Journal:

PLANT PHYSIOLOGY

Year:

2003

Language:

english

File:

PDF, 136 KB

english, 2003

12

Increased Food and Ecosystem Security via Perennial Grains

Glover, J. D., Reganold, J. P., Bell, L. W., Borevitz, J., Brummer, E. C., Buckler, E. S., Cox, C. M., Cox, T. S., Crews, T. E., Culman, S. W., DeHaan, L. R., Eriksson, D., Gill, B. S., Holland, J., H

Journal:

Year:

2010

Language:

english

File:

PDF, 204 KB

english, 2010

13

Natural Genetic Variation for Growth and Development Revealed by High-Throughput Phenotyping in Arabidopsis thaliana

Zhang, X., Hause, R. J., Borevitz, J. O., Coruzzi, G. M.

Journal:

Year:

2012

Language:

english

File:

PDF, 1.16 MB

english, 2012

14

Genomic diversity guides conservation strategies among rare terrestrial orchid species when taxonomy remains uncertain

Ahrens, Collin W., Supple, Megan A., Aitken, Nicola C., Cantrill, David J., Borevitz, Justin O., James, Elizabeth A.

Journal:

Annals of Botany

Year:

2017

Language:

english

File:

PDF, 1.50 MB

english, 2017

15

Genetic Variation for Cardiac Dysfunction in Drosophila

Ocorr, Karen A., Crawley, Timothy, Gibson, Greg, Bodmer, Rolf, Borevitz, Justin

Journal:

Year:

2007

Language:

english

File:

PDF, 1.00 MB

english, 2007

16

Genomic and Resistance Gene Homolog Diversity of the Dominant Tallgrass Prairie Species across the U.S. Great Plains Precipitation Gradient

Rouse, Matthew N., Saleh, Amgad A., Seck, Amadou, Keeler, Kathleen H., Travers, Steven E., Hulbert, Scot H., Garrett, Karen A., Borevitz, Justin O.

Journal:

Year:

2011

Language:

english

File:

PDF, 547 KB

english, 2011

17

Whole genome transcriptome polymorphisms inArabidopsis thaliana

Xu Zhang, Jake K Byrnes, Thomas S Gal, Wen-Hsiung Li, Justin O Borevitz

Journal:

Year:

2008

Language:

english

File:

PDF, 1.29 MB

english, 2008

18

Global Analysis of Allele-Specific Expression in Arabidopsis thaliana

Zhang, X., Borevitz, J. O.

Journal:

Year:

2009

Language:

english

File:

PDF, 3.27 MB

english, 2009

19

Natural Variation in Partial Resistance to Pseudomonas syringae Is Controlled by Two Major QTLs in Arabidopsis thaliana

Perchepied, Laure, Kroj, Thomas, Tronchet, Maurice, Loudet, Olivier, Roby, Dominique, Borevitz, Justin

Journal:

Year:

2006

Language:

english

File:

PDF, 280 KB

english, 2006

20

Genome-wide Analysis of Cis-regulatory Divergence between Species in the Arabidopsis Genus

He, F., Zhang, X., Hu, J., Turck, F., Dong, X., Goebel, U., Borevitz, J., de Meaux, J.

Journal:

Molecular Biology and Evolution

Year:

2012

Language:

english

File:

PDF, 618 KB

english, 2012

21

Isolation by distance and isolation by environment contribute to population differentiation in Protea repens (Proteaceae L.), a widespread South African species

Prunier, Rachel, Akman, Melis, Kremer, Colin T., Aitken, Nicola, Chuah, Aaron, Borevitz, Justin, Holsinger, Kent E.

Journal:

American Journal of Botany

Year:

2017

Language:

english

File:

PDF, 1.05 MB

english, 2017

22

Univariate/Multivariate Genome-Wide Association Scans Using Data from Families and Unrelated Samples

Zhang, Lei, Pei, Yu-Fang, Li, Jian, Papasian, Christopher J., Deng, Hong-Wen, Borevitz, Justin O.

Journal:

Year:

2009

Language:

english

File:

PDF, 374 KB

english, 2009

23

Genome-wide patterns of single-feature polymorphism in Arabidopsis thaliana

Borevitz, J. O., Hazen, S. P., Michael, T. P., Morris, G. P., Baxter, I. R., Hu, T. T., Chen, H., Werner, J. D., Nordborg, M., Salt, D. E., Kay, S. A., Chory, J., Weigel, D., Jones, J. D. G., Ecker, J

Journal:

Proceedings of the National Academy of Sciences

Year:

2007

Language:

english

File:

PDF, 770 KB

english, 2007

24

Adaptation genomics: The angel is in the details

Almonte, Andrew A., Borevitz, Justin O.

Journal:

Plant, Cell & Environment

Year:

2018

Language:

english

File:

PDF, 481 KB

english, 2018

25

The next generation of microarray research: applications in evolutionary and ecological genomics

Shiu, S-H, Borevitz, J O

Journal:

Year:

2006

Language:

english

File:

PDF, 147 KB

english, 2006

26

Genotypic diversity effects on biomass production in native perennial bioenergy cropping systems

Morris, Geoffrey P., Hu, Zhenbin, Grabowski, Paul P., Borevitz, Justin O., de Graaff, Marie-Anne, Miller, R. Michael, Jastrow, Julie D.

Journal:

Year:

2015

Language:

english

File:

PDF, 773 KB

english, 2015

27

The Evolution of Mammalian Gene Families

Demuth, Jeffery P., Bie, Tijl De, Stajich, Jason E., Cristianini, Nello, Hahn, Matthew W., Borevitz, Justin

Journal:

Year:

2006

Language:

english

File:

PDF, 295 KB

english, 2006

28

A Computational Approach for Functional Mapping of Quantitative Trait Loci That Regulate Thermal Performance Curves

Yap, John Stephen, Wang, Chenguang, Wu, Rongling, Borevitz, Justin

Journal:

Year:

2007

Language:

english

File:

PDF, 238 KB

english, 2007

29

Phenotypic Analysis of Arabidopsis Mutants: Hypocotyl Length

Borevitz, J., Neff, M.

Journal:

Cold Spring Harbor Protocols

Year:

2008

Language:

english

File:

PDF, 74 KB

english, 2008

30

The Impact of Genomics on the Study of Natural Variation in Arabidopsis

Justin O. Borevitz and Magnus Nordborg

Journal:

PLANT PHYSIOLOGY

Year:

2003

Language:

english

File:

PDF, 1.52 MB

english, 2003

31

Heterosis May Result in Selection Favouring the Products of Long-Distance Pollen Dispersal in Eucalyptus

Costa e Silva, João, Potts, Brad M., Lopez, Gustavo A., Borevitz, Justin O.

Journal:

Year:

2014

Language:

english

File:

PDF, 918 KB

english, 2014

32

Genotyping and Mapping With High-Density Oligonucleotide Arrays

Year:

2006

Language:

english

File:

PDF, 297 KB

english, 2006

33

Activation Tagging in Arabidopsis

Detlef Weigel, Ji Hoon Ahn, Miguel A. Blázquez, Justin O. Borevitz, Sioux K. Christensen, Christian Fankhauser, Cristina Ferrándiz, Igor Kardailsky, Elizabeth J. Malancharuvil, Michael M. Neff, Jasmin

Journal:

PLANT PHYSIOLOGY

Year:

2000

Language:

english

File:

PDF, 1.87 MB

english, 2000

34

Mapping of Imprinted Quantitative Trait Loci Using Immortalized F2 Populations

Wen, Yongxian, Wu, Weiren, Borevitz, Justin O.

Journal:

Year:

2014

Language:

english

File:

PDF, 537 KB

english, 2014

35

Mapping a plant's chemical vocabulary

Baxter, Ivan R, Borevitz, Justin O

Journal:

Nature Genetics

Year:

2006

Language:

english

File:

PDF, 147 KB

english, 2006

36

A large number of novel coding small open reading frames in the intergenic regions of the Arabidopsis thaliana genome are transcribed and/or under purifying selection

Hanada, K., Zhang, X., Borevitz, J. O., Li, W.-H., Shiu, S.-H.

Journal:

Genome Research

Year:

2007

Language:

english

File:

PDF, 560 KB

english, 2007

37

Geographic and Genetic Population Differentiation of the Amazonian Chocolate Tree (Theobroma cacao L)

Motamayor, Juan C., Lachenaud, Philippe, da Silva e Mota, Jay Wallace, Loor, Rey, Kuhn, David N., Brown, J. Steven, Schnell, Raymond J., Borevitz, Justin O.

Journal:

Year:

2008

Language:

english

File:

PDF, 236 KB

english, 2008

38

Genome-Wide Expression Profiling of the Arabidopsis Female Gametophyte Identifies Families of Small, Secreted Proteins

Jones-Rhoades, Matthew W., Borevitz, Justin O., Preuss, Daphne

Journal:

Year:

2007

Language:

english

File:

PDF, 748 KB

english, 2007

39

Highly Specific Gene Silencing by Artificial miRNAs in Rice

Warthmann, Norman, Chen, Hao, Ossowski, Stephan, Weigel, Detlef, Hervé, Philippe, Borevitz, Justin O.

Journal:

Year:

2008

Language:

english

File:

PDF, 458 KB

english, 2008

40

Natural variation in phytochrome signaling

Julin N. Maloof, Justin O. Borevitz, Detlef Weigel, Joanne Chory

Journal:

Seminars in Cell & Developmental Biology

Year:

2000

Language:

english

File:

PDF, 308 KB

english, 2000

41

New genetic and genomic tools for the study of floral evolution

Elena M. Kramer, Lynn Holappa, Billie Gould, M. Alejandra Jaramillo, Scott Hodges, Justin Borevitz, M Nordborg, Jeff Tomkins

Journal:

Developmental Biology

Year:

2006

Language:

english

File:

PDF, 62 KB

english, 2006

42

Widespread Interspecific Divergence in Cis-Regulation of Transposable Elements in the Arabidopsis Genus

He, F., Zhang, X., Hu, J.-Y., Turck, F., Dong, X., Goebel, U., Borevitz, J. O., de Meaux, J.

Journal:

Molecular Biology and Evolution

Year:

2012

Language:

english

File:

PDF, 628 KB

english, 2012

43

Examining the efficacy of a genotyping-by-sequencing technique for population genetic analysis of the mushroom Laccaria bicolor and evaluating whether a reference genome is necessary to assess homology

Wilson, A. W., Wickett, N. J., Grabowski, P., Fant, J., Borevitz, J., Mueller, G. M.

Journal:

Year:

2015

Language:

english

File:

PDF, 266 KB

english, 2015

44

A framework for incorporating evolutionary genomics into biodiversity conservation and management

Hoffmann, Ary, Griffin, Philippa, Dillon, Shannon, Catullo, Renee, Rane, Rahul, Byrne, Margaret, Jordan, Rebecca, Oakeshott, John, Weeks, Andrew, Joseph, Leo, Lockhart, Peter, Borevitz, Justin, Sgrò,

Journal:

Climate Change Responses

Year:

2015

Language:

english

File:

PDF, 1.52 MB

english, 2015

45

Mining the HapMap to dissect complex traits

Sung K Kim, Justin Borevitz

Journal:

Year:

2006

Language:

english

File:

PDF, 58 KB

english, 2006

46

Genetic architecture of regulatory variation in Arabidopsis thaliana

Zhang, X., Cal, A. J., Borevitz, J. O.

Journal:

Genome Research

Year:

2011

Language:

english

File:

PDF, 905 KB

english, 2011

47

Analysis and visualization of Arabidopsis thaliana GWAS using web 2.0 technologies

Huang, Y. S., Horton, M., Vilhjalmsson, B. J., Seren, U., Meng, D., Meyer, C., Ali Amer, M., Borevitz, J. O., Bergelson, J., Nordborg, M.

Journal:

Year:

2011

Language:

english

File:

PDF, 3.25 MB

english, 2011

48

Axe: rapid, competitive sequence read demultiplexing using a trie

Murray, Kevin D, Borevitz, Justin O

Journal:

Year:

2018

Language:

english

File:

PDF, 132 KB

english, 2018

49

Extending the Genotype in Brachypodium by Including DNA Methylation Reveals a Joint Contribution with Genetics on Adaptive Traits

Eichten, Steven R., Srivastava, Akanksha, Reddiex, Adam J., Ganguly, Diep R., Heussler, Alison, Streich, Jared C., Wilson, Pip B., Borevitz, Justin O.

Journal:

G3 Genes|Genome|Genetics

Year:

2020

File:

PDF, 756 KB

2020

50

10.1038/ng777

Maloof, Julin N., Borevitz, Justin O., Dabi, Tsegaye, Lutes, Jason, Nehring, Ramlah B., Redfern, Joanna L., Trainer, Gabriel T., Wilson, Jeanne M., Asami, Tadao, Berry, Charles C., Weigel, Detlef, Cho

Journal:

Nature Genetics

Year:

2001

Language:

english

File:

PDF, 1.05 MB

english, 2001

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